Cephalexin alternatives: what to try when cephalexin isn’t right

Cephalexin is a go-to for many bacterial infections, but it doesn’t work for every bug and some people can’t take it. If you need a substitute—because of resistance, side effects, or allergy—there are clear choices depending on the infection. Below I’ll walk through common alternatives, quick reasons to pick them, and practical warnings to share with your prescriber.

Common alternatives by infection

Skin and soft-tissue infections: If cephalexin fails or you’re allergic, options include clindamycin, doxycycline, and trimethoprim-sulfamethoxazole (TMP-SMX). Clindamycin covers many staph and strep strains and is often used for serious cellulitis, but it raises the risk of C. difficile diarrhea. Doxycycline and TMP-SMX are good for suspected MRSA. Amoxicillin-clavulanate helps when mixed bacteria (including anaerobes) are likely.

Respiratory infections: For sinusitis, bronchitis, or some pneumonia cases, amoxicillin-clavulanate or a second-generation cephalosporin like cefuroxime are common alternatives. Doxycycline and macrolides (for atypical bugs) can work too, but local resistance matters—ask your provider what’s common in your area.

Urinary tract infections (UTIs): For uncomplicated cystitis, nitrofurantoin and single-dose fosfomycin are solid choices and are often preferred over cephalexin. TMP-SMX also works if local resistance is low. For suspected kidney infection (pyelonephritis), oral fluoroquinolones or a course guided by urine culture may be needed, but fluoroquinolones carry higher risk of tendon and nerve problems so they’re kept for when needed.

How to pick the right alternative

Start with the bug and the site of infection. A throat or lung infection needs different coverage than a UTI or skin infection. Always tell your clinician about drug allergies, pregnancy, breastfeeding, liver or kidney problems, and current medicines—these change which antibiotic is safe.

Get cultures when possible. A wound or urine culture limits guesswork and avoids needless broad-spectrum antibiotics. If you have a true penicillin or cephalosporin allergy, discuss cross-reactivity with your doctor—many people who report an allergy can safely take some cephalosporins, but that decision should be clinical and cautious.

Watch side effects and interactions. Nitrofurantoin irritates lungs in long use, doxycycline is not for pregnant people or young children, clindamycin raises C. difficile risk, and TMP-SMX can interact with blood thinners and raise potassium. Fluoroquinolones increase tendon and nerve injury risk and should be reserved for clear indications.

Final practical tip: if symptoms don’t improve in 48–72 hours after starting an appropriate antibiotic, call your provider. Either the bug is resistant, the diagnosis is different, or a change in therapy is needed. Don’t switch antibiotics on your own—get a culture and professional advice.

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